STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63507.1PFAM: Domain of unknown function DUF305; KEGG: syf:Synpcc7942_B2645 hypothetical protein. (246 aa)    
Predicted Functional Partners:
EHA63506.1
Hypothetical protein.
       0.636
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.626
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.626
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.585
EHA63027.1
Helicase domain protein; PFAM: Helicase, C-terminal; KEGG: pmf:P9303_08571 helicase domain-containing protein.
  
     0.580
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.538
psbM
Photosystem II reaction center protein PsbM; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
  
     0.513
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.509
EHA63174.1
KEGG: npu:Npun_R5898 putative PAS/PAC sensor protein.
  
     0.500
EHA63182.1
KEGG: cyc:PCC7424_5159 hypothetical protein.
  
     0.482
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.