STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63554.1PFAM: Small multidrug resistance protein; KEGG: rca:Rcas_0172 small multidrug resistance protein; overlaps another CDS with the same product name. (105 aa)    
Predicted Functional Partners:
EHA63553.1
PFAM: Small multidrug resistance protein; KEGG: bbr:BB3914 putative membrane transport protein; overlaps another CDS with the same product name.
 
    
0.814
EHA63551.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: msl:Msil_3893 protein of unknown function DUF214.
     
 0.604
EHA63550.1
KEGG: msl:Msil_3892 hypothetical protein.
       0.592
EHA63552.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: amc:MADE_02303 putative lipoprotein releasing system ATP-binding component of ABC transporter; SMART: ATPase, AAA+ type, core.
       0.592
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.428
EHA63555.1
PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: llo:LLO_0930 multicopper oxidase.
       0.415
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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