STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (144 aa)    
Predicted Functional Partners:
EHA63580.1
KEGG: acr:Acry_3181 hypothetical protein.
 
 
 
 0.988
EHA62405.1
KEGG: rpd:RPD_2062 SpoVT/AbrB-like.
  
 
 0.894
EHA62403.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.778
EHA63578.1
KEGG: pla:Plav_2838 hypothetical protein.
       0.773
EHA62404.1
PFAM: PilT protein, N-terminal; KEGG: aac:Aaci_0602 PilT protein domain protein.
  
     0.745
EHA62351.1
KEGG: gvi:glr3475 hypothetical protein.
  
     0.622
EHA63581.1
KEGG: pmi:PMT9312_0691 hypothetical protein.
       0.439
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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