STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63582.1PFAM: Putative endonuclease, Z1 domain; KEGG: pmi:PMT9312_0373 endonuclease. (916 aa)    
Predicted Functional Partners:
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
   
 0.980
EHA63583.1
KEGG: pmi:PMT9312_0374 hypothetical protein.
 
   
 0.957
EHA58646.1
Glucosylceramidase; KEGG: pmf:P9303_19251 bile acid beta-glucosidase.
    
 0.952
EHA63587.1
DNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.
 
     0.945
EHA63430.1
KEGG: pmf:P9303_15251 heat shock protein 90; PFAM: ATPase-like, ATP-binding domain; Heat shock protein Hsp90, C-terminal; SMART: ATPase-like, ATP-binding domain.
   
 0.940
EHA62460.1
KEGG: fri:FraEuI1c_0484 putative esterase lipoprotein.
   
 0.939
EHA58557.1
KEGG: fri:FraEuI1c_0484 putative esterase lipoprotein.
   
 0.939
EHA63584.1
KEGG: pmi:PMT9312_0375 hypothetical protein.
 
     0.937
EHA62054.1
Cl- channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; KEGG: pmf:P9303_29991 putative chloride channel.
    
 0.932
EHA63262.1
KEGG: pmf:P9303_14031 hypothetical protein.
   
 0.854
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.