STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63595.1KEGG: pmf:P9303_18781 hypothetical protein. (117 aa)    
Predicted Functional Partners:
EHA63596.1
Signal peptidase I; KEGG: pmf:P9303_18791 leader peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family.
 
     0.802
EHA61759.1
HAMAP: Uncharacterised protein family UPF0367; KEGG: pmt:PMT1986 hypothetical protein; Belongs to the UPF0367 family.
  
     0.761
EHA63335.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: pmf:P9303_14501 Fe-S-cluster oxidoreductase.
  
     0.759
EHA64383.1
KEGG: pmf:P9303_18001 hypothetical protein.
  
     0.749
EHA63001.1
KEGG: pmf:P9303_05891 hypothetical protein.
  
     0.744
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.739
EHA62244.1
PFAM: Protein of unknown function DUF3146; KEGG: pmf:P9303_24591 hypothetical protein.
  
     0.733
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.732
ndhN
NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.731
EHA59415.1
PFAM: Ferredoxin; KEGG: pmt:PMT1664 ferredoxin.
  
     0.724
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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