Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63612.1Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein. (197 aa)    
Predicted Functional Partners:
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
    
 0.941
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
   0.870
EHA64116.1
KEGG: pmf:P9303_18311 6-pyruvoyl-tetrahydropterin synthase.
  
 
  0.806
EHA60216.1
KEGG: pmf:P9303_21491 hypothetical protein.
  
 
 
 0.805
EHA60080.1
KEGG: pmf:P9303_19571 hypothetical protein.
  
 
   0.792
EHA63611.1
Hypothetical protein.
       0.773
EHA62963.1
KEGG: pmf:P9303_19241 hypothetical protein.
  
     0.768
EHA60110.1
KEGG: pmm:PMM1307 hypothetical protein.
  
     0.768
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.766
EHA64228.1
KEGG: pmj:P9211_04981 hypothetical protein.
  
     0.764
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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