STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63616.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: pmt:PMT0287 putative iron ABC transporter, substrate binding protein. (334 aa)    
Predicted Functional Partners:
EHA64244.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmf:P9303_07081 putative iron ABC transporter.
 
 
 0.996
EHA64151.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_17671 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.972
EHA64327.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_06461 putative multidrug efflux ABC transporter; SMART: ATPase, AAA+ type, core.
    
 0.748
EHA63615.1
HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: pmt:PMT0286 putative hydroxylase; SMART: Prolyl 4-hydroxylase, alpha subunit.
 
    0.676
EHA60594.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
  0.531
EHA63359.1
KEGG: fph:Fphi_1292 hypothetical protein.
  
  
 0.522
EHA62289.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmf:P9303_25011 transporter, MFS family protein.
  
  
 0.522
EHA61782.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pmf:P9303_26681 putative RubisCO transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
    
 0.486
EHA63437.1
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: pmf:P9303_15311 ABC transporter for sugars, ATP binding protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 
 0.471
EHA63614.1
KEGG: pmf:P9303_20501 M20/M25/M40 family peptidase.
       0.421
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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