STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63620.1KEGG: pmf:P9303_18931 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic. (364 aa)    
Predicted Functional Partners:
EHA64015.1
PFAM: Peptidase S54, rhomboid domain; KEGG: pmf:P9303_17631 rhomboid family protein.
   
   0.882
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.860
EHA60643.1
PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: pmf:P9303_26161 beta-N-acetylglucosaminidase.
    
 0.828
EHA63619.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pmf:P9303_18921 putative nitrilase.
       0.800
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
   
 0.775
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
     
 0.757
EHA58642.1
KEGG: syn:slr1774 hypothetical protein.
    
 0.755
EHA63872.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT0538 hypothetical protein.
     
 0.753
EHA64338.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT1329 hypothetical protein.
     
 0.753
EHA63622.1
TIGRFAM: Solanesyl diphosphate synthase; KEGG: pmj:P9211_10311 polyprenyl synthetase; solanesyl diphosphate synthase (sds); PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.690
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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