STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63635.1S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT0998 porin; Belongs to the OprB family. (562 aa)    
Predicted Functional Partners:
EHA62242.1
KEGG: pmf:P9303_24571 hypothetical protein.
  
     0.773
EHA62243.1
KEGG: pmt:PMT1833 hypothetical protein.
  
     0.768
EHA64402.1
PFAM: Bacterial surface antigen (D15); Surface antigen variable number; Polypeptide-transport-associated, ShlB-type; KEGG: pmf:P9303_05491 outer envelope membrane protein.
  
   
 0.748
EHA63304.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: pmf:P9303_16801 putative permease.
  
     0.735
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
   
 0.722
EHA63401.1
KEGG: pmf:P9303_14991 hypothetical protein.
  
     0.714
EHA61869.1
PFAM: Type II/III secretion system; NolW-like; KEGG: pmt:PMT2098 general (type II) secretion pathway protein D precursor; Belongs to the bacterial secretin family.
  
     0.699
EHA60111.1
PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: pmt:PMT0320 hypothetical protein.
  
     0.694
EHA59359.1
TIGRFAM: Conserved hypothetical protein CHP03492; KEGG: pmf:P9303_22611 hypothetical protein.
  
     0.677
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
  
   
 0.675
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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