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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63636.1KEGG: pmj:P9211_10191 hypothetical protein. (75 aa)    
Predicted Functional Partners:
EHA63004.1
PFAM: Ferredoxin; KEGG: pmt:PMT1184 hypothetical protein.
  
     0.773
EHA63183.1
KEGG: npu:Npun_F3905 hypothetical protein.
  
     0.772
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
     0.772
EHA62511.1
PFAM: HTH transcriptional regulator, GntR; KEGG: pmf:P9303_01531 putative transcriptional regulator.
  
     0.771
EHA60623.1
KEGG: pmf:P9303_02201 hypothetical protein.
  
     0.766
EHA64384.1
KEGG: pmf:P9303_05641 hypothetical protein.
  
     0.764
EHA64224.1
KEGG: pmf:P9303_07371 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding.
  
     0.760
EHA64283.1
KEGG: pmf:P9303_05981 hypothetical protein.
  
     0.760
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.757
EHA62244.1
PFAM: Protein of unknown function DUF3146; KEGG: pmf:P9303_24591 hypothetical protein.
  
     0.756
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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