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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63657.1KEGG: pmf:P9303_16351 anti-sigma regulatory factor (Ser/Thr protein kinase). (168 aa)    
Predicted Functional Partners:
EHA63708.1
PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: pmf:P9303_15781 STAS domain-containing protein; Belongs to the anti-sigma-factor antagonist family.
  
 0.998
EHA59112.1
KEGG: pmt:PMT0012 protein phosphatase 2C domain-containing protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
 
 0.990
EHA63382.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; KEGG: pmf:P9303_14841 hypothetical protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
 
 0.785
EHA63836.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; KEGG: pmf:P9303_14271 putative type III sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2.
  
 
 0.785
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
   
    0.738
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
       0.636
EHA60233.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ana:alr4878 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain.
  
  
 0.600
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
  
 
 0.548
EHA62420.1
Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; KEGG: pmc:P9515_13861 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis.
 
   0.543
comB
KEGG: pmt:PMT0396 2-phosphosulfolactate phosphatase; HAMAP: 2-phosphosulpholactate phosphatase ComB; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.
  
     0.536
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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