STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63673.1PFAM: Uncharacterised protein family UPF0102; KEGG: pmf:P9303_16141 hypothetical protein; Belongs to the UPF0102 family. (129 aa)    
Predicted Functional Partners:
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
    0.644
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.597
EHA63674.1
KEGG: jan:Jann_4029 hypothetical protein.
       0.567
EHA62368.1
KEGG: pmc:P9515_13741 hypothetical protein.
  
     0.556
EHA64255.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
  
     0.537
EHA64409.1
KaiA family protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
  
     0.533
EHA61875.1
KEGG: pmf:P9303_27821 hypothetical protein.
  
     0.513
EHA63154.1
KEGG: cyn:Cyan7425_3675 protein of unknown function DUF939.
  
     0.507
EHA60225.1
KEGG: pmt:PMT0199 hypothetical protein.
  
     0.503
EHA63675.1
PFAM: Pentapeptide repeat; KEGG: pmt:PMT0626 hypothetical protein.
       0.496
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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