Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63690.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT0643 integral membrane protein, DUF6. (304 aa)    
Predicted Functional Partners:
EHA63142.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
  0.680
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.642
EHA60385.1
PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: pmf:P9303_04951 putative aminopeptidase P; Belongs to the peptidase M24B family.
  
  
  0.586
EHA62457.1
KEGG: gvi:glr1903 hypothetical protein.
    
  0.549
EHA58637.1
PFAM: Sulfatase; KEGG: pmt:PMT1515 sulfatase.
    
  0.549
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
  0.545
EHA60217.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: pmf:P9303_21501 cobalt ABC transporter permease.
     
  0.496
EHA63100.1
PFAM: Polyprenyl synthetase; KEGG: pmf:P9303_09331 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.464
EHA63622.1
TIGRFAM: Solanesyl diphosphate synthase; KEGG: pmj:P9211_10311 polyprenyl synthetase; solanesyl diphosphate synthase (sds); PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
    
  0.464
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
   0.445
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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