STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63705.1PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein. (81 aa)    
Predicted Functional Partners:
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
  
     0.764
EHA63281.1
KEGG: pmt:PMT0793 ribonucleotide reductase (class II); TIGRFAM: Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.761
EHA64187.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.753
EHA63258.1
KEGG: pmt:PMT0809 hypothetical protein.
  
     0.735
EHA59356.1
Transcriptional regulator PadR family protein; PFAM: Transcription regulator PadR N-terminal-like; KEGG: tel:tlr1955 period-extender gene product.
  
     0.725
EHA58612.1
KEGG: pmf:P9303_19361 hypothetical protein.
  
     0.725
EHA64186.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pma:Pro0533 dehydrogenase.
  
     0.709
EHA63321.1
KEGG: cyn:Cyan7425_3740 hypothetical protein.
  
     0.696
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.695
EHA63991.1
KEGG: pme:NATL1_11941 hypothetical protein.
  
     0.688
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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