STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63716.1Hypothetical protein; KEGG: syf:Synpcc7942_0136 phage integrase. (374 aa)    
Predicted Functional Partners:
EHA63235.1
KEGG: pmf:P9303_12241 hypothetical protein.
  
     0.761
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.761
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.753
EHA63281.1
KEGG: pmt:PMT0793 ribonucleotide reductase (class II); TIGRFAM: Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.751
EHA64274.1
KEGG: cyn:Cyan7425_3822 hypothetical protein.
  
     0.715
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
  
     0.679
EHA59356.1
Transcriptional regulator PadR family protein; PFAM: Transcription regulator PadR N-terminal-like; KEGG: tel:tlr1955 period-extender gene product.
  
     0.662
EHA59340.1
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: pmf:P9303_22881 hypothetical protein.
  
     0.634
EHA63258.1
KEGG: pmt:PMT0809 hypothetical protein.
  
     0.612
psbN
Protein psbN; May play a role in photosystem I and II biogenesis. Belongs to the PsbN family.
  
     0.612
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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