EHA63784.1 protein (Synechococcus sp. WH 8016)

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EHA63784.1

PFAM: DNA ligase, ATP-dependent, central; KEGG: bpm:BURPS1710b_1648 PBCV-1 DNA ligase. (297 aa)

Predicted Functional Partners:

EHA59101.1

0.990

polA

0.951

EHA64252.1

0.891

EHA61763.1

0.873

EHA63212.1

0.776

EHA64211.1

0.772

EHA63027.1

0.717

EHA59333.1

0.668

rpoA

0.619

EHA63785.1

0.584

Your Current Organism:

Synechococcus sp. WH 8016

NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHA59101.1	EHA59333.1	Syn8016DRAFT_2824	Syn8016DRAFT_2703	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	0.915
EHA59101.1	EHA61763.1	Syn8016DRAFT_2824	Syn8016DRAFT_1835	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	0.996
EHA59101.1	EHA63212.1	Syn8016DRAFT_2824	Syn8016DRAFT_0253	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: pmf:P9303_13301 RecF protein:ABC transporter.	0.599
EHA59101.1	EHA63784.1	Syn8016DRAFT_2824	Syn8016DRAFT_0825	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	PFAM: DNA ligase, ATP-dependent, central; KEGG: bpm:BURPS1710b_1648 PBCV-1 DNA ligase.	0.990
EHA59101.1	EHA64252.1	Syn8016DRAFT_2824	Syn8016DRAFT_1295	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: pmf:P9303_06981 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.	0.966
EHA59101.1	polA	Syn8016DRAFT_2824	Syn8016DRAFT_0084	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
EHA59333.1	EHA59101.1	Syn8016DRAFT_2703	Syn8016DRAFT_2824	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.915
EHA59333.1	EHA61763.1	Syn8016DRAFT_2703	Syn8016DRAFT_1835	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	0.913
EHA59333.1	EHA63027.1	Syn8016DRAFT_2703	Syn8016DRAFT_0068	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	Helicase domain protein; PFAM: Helicase, C-terminal; KEGG: pmf:P9303_08571 helicase domain-containing protein.	0.993
EHA59333.1	EHA63212.1	Syn8016DRAFT_2703	Syn8016DRAFT_0253	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: pmf:P9303_13301 RecF protein:ABC transporter.	0.793
EHA59333.1	EHA63784.1	Syn8016DRAFT_2703	Syn8016DRAFT_0825	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	PFAM: DNA ligase, ATP-dependent, central; KEGG: bpm:BURPS1710b_1648 PBCV-1 DNA ligase.	0.668
EHA59333.1	polA	Syn8016DRAFT_2703	Syn8016DRAFT_0084	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.985
EHA59333.1	rpoA	Syn8016DRAFT_2703	Syn8016DRAFT_2673	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
EHA61763.1	EHA59101.1	Syn8016DRAFT_1835	Syn8016DRAFT_2824	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.996
EHA61763.1	EHA59333.1	Syn8016DRAFT_1835	Syn8016DRAFT_2703	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	KEGG: pmf:P9303_22951 Rad3-related DNA helicase.	0.913
EHA61763.1	EHA63027.1	Syn8016DRAFT_1835	Syn8016DRAFT_0068	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	Helicase domain protein; PFAM: Helicase, C-terminal; KEGG: pmf:P9303_08571 helicase domain-containing protein.	0.431
EHA61763.1	EHA63212.1	Syn8016DRAFT_1835	Syn8016DRAFT_0253	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: pmf:P9303_13301 RecF protein:ABC transporter.	0.739
EHA61763.1	EHA63784.1	Syn8016DRAFT_1835	Syn8016DRAFT_0825	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	PFAM: DNA ligase, ATP-dependent, central; KEGG: bpm:BURPS1710b_1648 PBCV-1 DNA ligase.	0.873
EHA61763.1	EHA64252.1	Syn8016DRAFT_1835	Syn8016DRAFT_1295	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: pmf:P9303_06981 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.	0.854
EHA61763.1	polA	Syn8016DRAFT_1835	Syn8016DRAFT_0084	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pmf:P9303_26481 DNA polymerase III subunit delta'.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.979