STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63828.1TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: pmt:PMT0589 ABC transporter. (301 aa)    
Predicted Functional Partners:
EHA63829.1
DevC protein; KEGG: pmt:PMT0588 ABC-transporter, membrane spanning component; TIGRFAM: DevC protein; PFAM: Domain of unknown function DUF214, ABC transporter permease.
 
 
 0.990
EHA63830.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter ATP-binding subunit, DevA type; KEGG: pmt:PMT0587 ABC transporter, ATP-binding component; PFAM: ABC transporter-like.
 
 0.959
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
       0.800
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
  
 0.749
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
 0.727
EHA62524.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; SMART: ATPase, AAA+ type, core; Cyclic nucleotide-binding domain; TIGRFAM: ATPase, type I secretion system, HlyB; KEGG: pmt:PMT0077 multidrug ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-binding domain.
  
 0.719
EHA63831.1
KEGG: pme:NATL1_07871 hypothetical protein.
       0.687
EHA62214.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0980 outer membrane efflux protein.
   
 0.684
EHA64310.1
PFAM: ABC transporter-like; KEGG: pmn:PMN2A_1766 ATPase; SMART: ATPase, AAA+ type, core.
  
 0.653
EHA63448.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pmf:P9303_15441 putative ABC transporter.
  
 
 0.651
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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