STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63831.1KEGG: pme:NATL1_07871 hypothetical protein. (51 aa)    
Predicted Functional Partners:
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
       0.687
EHA63828.1
TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: pmt:PMT0589 ABC transporter.
       0.687
EHA63829.1
DevC protein; KEGG: pmt:PMT0588 ABC-transporter, membrane spanning component; TIGRFAM: DevC protein; PFAM: Domain of unknown function DUF214, ABC transporter permease.
       0.687
EHA63830.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter ATP-binding subunit, DevA type; KEGG: pmt:PMT0587 ABC transporter, ATP-binding component; PFAM: ABC transporter-like.
       0.687
EHA63832.1
PFAM: Glycosyl transferase, family 2; KEGG: pmt:PMT0585 glycosyl transferase family protein.
       0.563
EHA63826.1
KEGG: pmt:PMT0591 Zn-dependent peptidase; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; Belongs to the peptidase M16 family.
       0.523
EHA63825.1
PFAM: Peptidase M16, C-terminal; KEGG: pmf:P9303_16561 insulinase family protein.
       0.517
EHA63833.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.505
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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