STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63835.1PFAM: Protein of unknown function DUF92, TMEM19; KEGG: pmf:P9303_14261 hypothetical protein. (259 aa)    
Predicted Functional Partners:
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.672
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: pmf:P9303_06961 glutamate-1-semialdehyde aminotransferase.
 
      0.649
EHA63440.1
KEGG: pmf:P9303_15341 hypothetical protein.
  
     0.645
EHA59291.1
PFAM: Glycosyl transferase, family 2; KEGG: pmt:PMT1766 glycosyl transferase family protein.
 
      0.638
EHA63439.1
Protein of unknown function DUF2499; PFAM: Uncharacterised protein family Ycf49; KEGG: pmt:PMT0689 hypothetical protein.
  
     0.612
EHA64190.1
PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein.
  
     0.559
EHA63834.1
KEGG: aau:AAur_1561 translation initiation factor IF-2.
       0.558
EHA63464.1
KEGG: pmf:P9303_15591 hypothetical protein.
  
     0.553
EHA62311.1
Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.549
EHA61779.1
TIGRFAM: Phytoene desaturase; KEGG: pmt:PMT2004 phytoene desaturase; PFAM: Amine oxidase.
  
     0.544
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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