STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63837.1Lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; KEGG: pmf:P9303_14281 lysophospholipase L1. (227 aa)    
Predicted Functional Partners:
EHA61853.1
Cellulose-binding family II; KEGG: pmf:P9303_28031 hypothetical protein; PFAM: Cellulose-binding domain, family II, bacterial type; SMART: Cellulose-binding domain, family II, bacterial type.
   
 0.836
EHA58584.1
Hep_Hag repeat-containing protein; PFAM: Hep/Hag; Adenoviral fibre protein, repeat/shaft region; KEGG: bpl:BURPS1106A_2083 putative outer membrane protein.
   
 0.836
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
  
 
  0.829
EHA63838.1
KEGG: pmt:PMT0782 putative phosphonate ABC transporter.
 
     0.774
EHA63839.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmj:P9211_07851 putative phosphonate ABC transporter; SMART: ATPase, AAA+ type, core.
       0.744
EHA63840.1
TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: pmt:PMT0780 phosphonate ABC transporter phosphonate-binding protein.
       0.744
EHA58604.1
TIGRFAM: Conserved hypothetical protein CHP03792; KEGG: pmf:P9303_19451 hypothetical protein.
  
     0.741
EHA63594.1
KEGG: pmt:PMT0409 hypothetical protein.
  
   
 0.716
EHA62336.1
KEGG: pmj:P9211_17161 hypothetical protein.
  
     0.698
EHA63841.1
Aspartate transaminase; KEGG: pmt:PMT0779 aminotransferase class-I; PFAM: Aminotransferase, class I/classII.
     
 0.696
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.