STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63859.1PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: pmf:P9303_16901 hypothetical protein. (178 aa)    
Predicted Functional Partners:
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
    
 0.876
EHA63399.1
KEGG: pmf:P9303_14971 hypothetical protein.
   
 
 0.863
EHA64206.1
KEGG: pmt:PMT1249 peptidoglycan synthetase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
    
 0.820
EHA59148.1
TIGRFAM: Penicillin-binding protein 2; KEGG: pmt:PMT0048 putative penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
    
 0.820
EHA63860.1
KEGG: pmf:P9303_16911 putative coat protein.
       0.800
EHA64226.1
KEGG: pmf:P9303_07351 hypothetical protein.
  
     0.762
EHA63626.1
PFAM: Protein of unknown function DUF1350; KEGG: pmt:PMT0388 hypothetical protein.
  
     0.750
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
  
     0.742
EHA64190.1
PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein.
  
     0.739
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
     0.725
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.