Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA63864.1PFAM: Pentapeptide repeat; KEGG: pmf:P9303_16951 hypothetical protein. (172 aa)    
Predicted Functional Partners:
EHA63865.1
KEGG: pmf:P9303_16961 putative cobalamin synthesis protein; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobW; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal.
       0.815
EHA61868.1
PFAM: Pentapeptide repeat; KEGG: pmf:P9303_27891 hypothetical protein.
  
     0.755
EHA59395.1
PFAM: Pentapeptide repeat; KEGG: npu:Npun_F0732 pentapeptide repeat-containing protein.
  
     0.752
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.666
EHA63863.1
KEGG: pmt:PMT0558 putative uracil phosphoribosyltransferase.
  
    0.635
EHA63862.1
KEGG: pmf:P9303_16931 hypothetical protein.
       0.595
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
    0.530
ilvD
PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: pmt:PMT0560 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.518
EHA61779.1
TIGRFAM: Phytoene desaturase; KEGG: pmt:PMT2004 phytoene desaturase; PFAM: Amine oxidase.
  
     0.463
EHA61906.1
PFAM: CHASE2; KEGG: pmf:P9303_03401 hypothetical protein.
     
  0.455
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.