STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63874.1Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pmf:P9303_17291 putative oxidoreductase. (359 aa)    
Predicted Functional Partners:
EHA64387.1
SMP-30/Gluconolaconase/LRE-like region-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: ppm:PPSC2_c4886 diguanylate cyclase/phosphodiesterase with pas/pac and gaf sensor(s).
 
 
 0.768
EHA62299.1
Glutamine--scyllo-inositol transaminase; KEGG: pmf:P9303_25161 putative pleiotropic regulatory protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.763
EHA63875.1
KEGG: pmt:PMT0535 hypothetical protein.
       0.755
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
       0.755
EHA62386.1
Glutamine--scyllo-inositol transaminase; KEGG: reu:Reut_B5377 DegT/DnrJ/EryC1/StrS aminotransferase:aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.744
EHA59185.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: pmt:PMT0115 dTDP-glucose-4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.674
lysS
PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: pmf:P9303_01841 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.660
EHA62481.1
Fructokinase; KEGG: pmt:PMT0136 putative carbohydrate kinase; PFAM: Carbohydrate/purine kinase.
 
 
 0.644
EHA64355.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmt:PMT1312 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.639
EHA63019.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmf:P9303_08511 putative chaperon-like protein for quinone binding in photosystem II.
     
 0.587
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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