STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63877.1Nuclear protein SET; PFAM: SET domain; KEGG: hoh:Hoch_1311 hypothetical protein. (123 aa)    
Predicted Functional Partners:
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.960
EHA60082.1
KEGG: syf:Synpcc7942_1393 histone deacetylase/AcuC/AphA family protein-like; PFAM: Histone deacetylase superfamily.
   
 0.911
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
    
 0.825
EHA61930.1
SNF2-related protein; KEGG: pmt:PMT2158 SNF2/helicase domain-containing protein; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
    
 0.810
EHA59136.1
Helicase domain protein; KEGG: pmf:P9303_00371 superfamily II DNA/RNA helicases, SNF2 family protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal.
    
 0.810
EHA63419.1
KEGG: pmf:P9303_15171 DnaJ2 protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal.
    
  0.799
EHA63483.1
KEGG: dtu:Dtur_0018 chaperone protein DnaJ; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
    
  0.799
EHA60431.1
KEGG: pmf:P9303_04511 DnaJ-like protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
    
  0.799
EHA60479.1
KEGG: pmf:P9303_03871 DnaJ3 protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
    
  0.799
EHA60656.1
KEGG: pmt:PMT1977 putative heat shock protein DnaJ; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
    
  0.799
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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