STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63905.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmh:P9215_08151 serine/threonine specific protein phosphatase. (246 aa)    
Predicted Functional Partners:
EHA63471.1
DEAD/H associated domain protein; KEGG: pmm:PMM0728 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
 
    0.818
EHA63470.1
PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: pcu:pc0950 ATP-dependent DNA ligase.
 
   
 0.806
EHA63469.1
KEGG: mxa:MXAN_6073 hypothetical protein.
 
     0.800
EHA63904.1
KEGG: pmf:P9303_17511 hypothetical protein.
       0.773
EHA63903.1
Hypothetical protein.
       0.542
EHA63906.1
Hypothetical protein.
       0.512
EHA63907.1
ABC-type transporter, periplasmic subunit family 3; KEGG: pmt:PMT0515 GIC family ligand gated channel; PFAM: Extracellular solute-binding protein, family 3; Ion transport 2; SMART: Ionotropic glutamate receptor; Extracellular solute-binding protein, family 3.
       0.488
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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