STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63926.1PFAM: Cytochrome c, class I; KEGG: pmf:P9303_17581 cytochrome c, class IC:cytochrome c, class I. (113 aa)    
Predicted Functional Partners:
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
  
 0.837
psbU
Photosystem II 12 kDa extrinsic protein; Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
   
 0.770
EHA63922.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmj:P9211_15231 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.741
EHA63923.1
KEGG: pmf:P9303_29301 hypothetical protein.
       0.741
EHA63924.1
KEGG: pmf:P9303_29311 hypothetical protein.
       0.741
EHA63925.1
PFAM: Protein of unknown function DUF318, transmembrane; KEGG: pmt:PMT2207 permease.
       0.741
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.722
EHA58618.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_11831 zeta-carotene desaturase-like protein.
  
     0.718
EHA64351.1
PFAM: Photosystem I PsaF, reaction centre subunit III; KEGG: syf:Synpcc7942_1250 photosystem I reaction center subunit III precursor.
  
   
 0.701
EHA64126.1
KEGG: pmf:P9303_18191 cytochrome c, class IC:cytochrome c, class I.
  
  
 
0.679
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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