STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63931.1ABC-type metal ion transporter, periplasmic subunit; PFAM: ABC transporter metal-binding lipoprotein; KEGG: pmt:PMT0418 ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (316 aa)    
Predicted Functional Partners:
EHA63929.1
ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: pmt:PMT0416 ABC transporter.
 
 0.998
EHA63930.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_18701 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.997
EHA63921.1
ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: pmf:P9303_29261 ABC transporter.
 
 
 0.963
EHA63922.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmj:P9211_15231 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.963
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.463
EHA63928.1
KEGG: ccs:CCNA_01348 hypothetical protein.
       0.461
rpmB
Ribosomal protein L28; KEGG: pmf:P9303_15261 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.458
EHA63920.1
ABC-type metal ion transporter, periplasmic subunit; PFAM: ABC transporter metal-binding lipoprotein; KEGG: pmf:P9303_29281 ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
    
0.441
EHA63865.1
KEGG: pmf:P9303_16961 putative cobalamin synthesis protein; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobW; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal.
  
  
 0.436
EHA64242.1
Cobalamin synthesis protein P47K; KEGG: pmf:P9303_07121 G3E family GTPase; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal.
  
  
 0.436
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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