STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63973.1PFAM: Orange carotenoid-binding protein, N-terminal; Nuclear transport factor 2; KEGG: cyc:PCC7424_4467 orange carotenoid protein. (318 aa)    
Predicted Functional Partners:
EHA63975.1
KEGG: mar:MAE_18920 hypothetical protein.
 
 
 
 0.940
EHA60408.1
PFAM: Phycobilisome linker domain; Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0328 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.929
EHA63377.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyn:Cyan7425_1034 phycobilisome protein.
  
 
 
 0.922
EHA60571.1
PFAM: Phycobilisome linker domain; KEGG: syf:Synpcc7942_2030 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
   0.919
EHA60409.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0327 allophycocyanin alpha chain.
  
 
 
 0.915
EHA60411.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.913
EHA63974.1
PFAM: Fatty acid desaturase, type 1; KEGG: cyj:Cyan7822_5104 fatty acid desaturase.
 
   
 0.882
EHA63644.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_2158 allophycocyanin, beta subunit.
  
 
 
 0.878
EHA60410.1
KEGG: naz:Aazo_2433 allophycocyanin subunit beta; TIGRFAM: Allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
 
 
 0.876
EHA59397.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: npu:Npun_F0735 phycobilisome protein.
  
 
 
 0.835
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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