STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63984.1PFAM: Uncharacterised protein family YphA; KEGG: pmh:P9215_15891 hypothetical protein. (159 aa)    
Predicted Functional Partners:
EHA63612.1
Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein.
  
   0.591
EHA62269.1
KEGG: pmt:PMT1859 hypothetical protein.
  
     0.545
EHA62994.1
PFAM: SNARE associated Golgi protein; KEGG: pmf:P9303_20181 hypothetical protein.
  
   
 0.514
EHA63003.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT0918 integral membrane protein, DUF6.
  
 
   0.513
EHA63051.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmj:P9211_11461 major facilitator superfamily multidrug-efflux transporter.
  
     0.493
EHA63511.1
Hypothetical protein; KEGG: pmt:PMT0232 putative hydrogenase accessory protein.
  
     0.471
EHA60216.1
KEGG: pmf:P9303_21491 hypothetical protein.
  
     0.455
EHA59339.1
UBA/THIF-type NAD/FAD binding protein; KEGG: pmf:P9303_22891 molybdopterin biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like.
    
  0.451
EHA63985.1
KEGG: pmn:PMN2A_0784 transcription regulator.
       0.406
EHA60477.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pma:Pro0244 lactoylglutathione lyase/catechol 2,3-dioxygenase related enzyme.
  
     0.406
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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