STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63985.1KEGG: pmn:PMN2A_0784 transcription regulator. (139 aa)    
Predicted Functional Partners:
EHA60408.1
PFAM: Phycobilisome linker domain; Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0328 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
    
 
 0.731
EHA60411.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
    
   0.730
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
    
  0.619
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
  
     0.617
EHA60110.1
KEGG: pmm:PMM1307 hypothetical protein.
  
     0.604
EHA61979.1
Trypsin; KEGG: hna:Hneap_2025 trypsin.
  
     0.596
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.592
EHA63612.1
Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein.
  
     0.576
EHA63986.1
Hypothetical protein.
       0.547
EHA63051.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmj:P9211_11461 major facilitator superfamily multidrug-efflux transporter.
  
     0.546
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.