STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63987.1KEGG: syn:slr0069 hypothetical protein. (180 aa)    
Predicted Functional Partners:
EHA58642.1
KEGG: syn:slr1774 hypothetical protein.
  
     0.709
EHA63363.1
PFAM: Carbohydrate-selective porin OprB; KEGG: syn:slr1163 hypothetical protein; Belongs to the OprB family.
  
     0.610
EHA63988.1
PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
       0.574
EHA63989.1
KEGG: pmt:PMT0471 glutathione S-transferase.
 
     0.548
EHA64119.1
PFAM: Protein of unknown function DUF2214, membrane; KEGG: pmt:PMT0455 hypothetical protein.
  
     0.488
EHA63975.1
KEGG: mar:MAE_18920 hypothetical protein.
  
     0.464
EHA63990.1
PFAM: Protein of unknown function DUF1830; KEGG: pmm:PMM0958 hypothetical protein.
       0.413
EHA61960.1
PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: syf:Synpcc7942_0096 hypothetical protein.
  
     0.407
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.