STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63999.1PFAM: Domain of unknown function DUF861, cupin-3; KEGG: pmt:PMT1028 hypothetical protein. (107 aa)    
Predicted Functional Partners:
EHA64000.1
Pheophorbide a oxygenase; KEGG: syn:slr1747 hypothetical protein; PFAM: Pheophorbide a oxygenase; Rieske [2Fe-2S] iron-sulphur domain.
       0.773
EHA63214.1
PFAM: Aminoglycoside phosphotransferase; KEGG: pmt:PMT0868 hypothetical protein.
  
     0.561
EHA64001.1
KEGG: ana:all1003 hypothetical protein.
       0.528
EHA63964.1
KEGG: pmf:P9303_11021 hypothetical protein.
  
     0.447
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.