STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64013.1PFAM: Amine oxidase; KEGG: syf:Synpcc7942_1723 carotene isomerase. (510 aa)    
Predicted Functional Partners:
EHA61778.1
Phytoene synthase; KEGG: pmj:P9211_01581 squalene and phytoene synthase; PFAM: Squalene/phytoene synthase.
 
 
 0.963
EHA60648.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.841
EHA61779.1
TIGRFAM: Phytoene desaturase; KEGG: pmt:PMT2004 phytoene desaturase; PFAM: Amine oxidase.
  
  
 0.837
EHA63297.1
TIGRFAM: Geranylgeranyl reductase, plant/cyanobacteria; Geranylgeranyl reductase; Geranylgeranyl reductase, plant/prokaryotic; KEGG: pmj:P9211_10031 aromatic-ring hydroxylase (flavoprotein monooxygenase).
  
 
 0.662
EHA63499.1
KEGG: mar:MAE_40890 hypothetical protein.
  
     0.641
EHA62303.1
Cobaltochelatase subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.638
EHA60157.1
TIGRFAM: Chlorophyll synthase, ChlG; Bacteriochlorophyll/chlorophyll synthetase; KEGG: pmt:PMT0272 bacteriochlorophyll/chlorophyll a synthase; PFAM: UbiA prenyltransferase.
 
 
 0.617
EHA61812.1
TIGRFAM: Magnesium protoporphyrin O-methyltransferase; KEGG: pmt:PMT2040 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase, C-terminal.
  
  
 0.607
EHA58618.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_11831 zeta-carotene desaturase-like protein.
  
  
 0.600
EHA63126.1
KEGG: vcn:VOLCADRAFT_76013 hypothetical protein.
  
   
 0.584
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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