STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64031.1PFAM: Protein of unknown function DUF2605; KEGG: ana:all0334 hypothetical protein. (105 aa)    
Predicted Functional Partners:
EHA59369.1
PFAM: PBS lyase HEAT-like repeat; KEGG: ter:Tery_5046 heat domain-containing protein; overlaps another CDS with the same product name.
  
     0.770
EHA59370.1
PFAM: PBS lyase HEAT-like repeat; KEGG: syf:Synpcc7942_1054 heat repeat-containing PBS lyase; overlaps another CDS with the same product name.
  
     0.765
EHA60408.1
PFAM: Phycobilisome linker domain; Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0328 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.763
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.761
EHA59396.1
PFAM: Phycobilisome linker domain; KEGG: cyh:Cyan8802_1383 phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.758
EHA60571.1
PFAM: Phycobilisome linker domain; KEGG: syf:Synpcc7942_2030 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.755
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.755
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.754
EHA59417.1
PFAM: UspA; KEGG: syf:Synpcc7942_0700 hypothetical protein.
  
     0.753
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.749
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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