STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64051.1KEGG: pmt:PMT0443 hypothetical protein. (246 aa)    
Predicted Functional Partners:
EHA64049.1
KEGG: pmf:P9303_18401 hypothetical protein.
       0.651
EHA64050.1
KEGG: pmf:P9303_18391 acyl esterase; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal.
       0.651
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.551
EHA64047.1
PFAM: Protein of unknown function DUF2518; KEGG: pmf:P9303_18421 hypothetical protein.
       0.496
EHA64048.1
KEGG: pmf:P9303_18411 hypothetical protein.
       0.496
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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