STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (765 aa)    
Predicted Functional Partners:
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.999
EHA62345.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.998
EHA63856.1
TIGRFAM: Glucose-1-phosphate adenylyltransferase; KEGG: pmf:P9303_16851 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.996
EHA64380.1
Isoamylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; KEGG: pmf:P9303_05691 putative isoamylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
 
 
0.987
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
 
 
 0.961
EHA63127.1
4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; KEGG: pmt:PMT1071 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77.
 
 
 0.947
EHA60584.1
KEGG: pmt:PMT1614 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal.
  
 
 0.923
EHA63084.1
PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; KEGG: pmt:PMT1122 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
     
 0.876
EHA60571.1
PFAM: Phycobilisome linker domain; KEGG: syf:Synpcc7942_2030 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 0.872
EHA59431.1
PFAM: Plant neutral invertase; KEGG: pmf:P9303_21831 putative neutral invertase-like protein.
  
 
 0.851
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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