STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64055.1Plastocyanin; KEGG: pmt:PMT0447 plastocyanin; TIGRFAM: Plastocyanin; PFAM: Blue (type 1) copper domain. (119 aa)    
Predicted Functional Partners:
petA
Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
    
   0.943
EHA64351.1
PFAM: Photosystem I PsaF, reaction centre subunit III; KEGG: syf:Synpcc7942_1250 photosystem I reaction center subunit III precursor.
   
 
 0.913
EHA63555.1
PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: llo:LLO_0930 multicopper oxidase.
 
 
 0.899
EHA63550.1
KEGG: msl:Msil_3892 hypothetical protein.
   
   0.885
EHA62489.1
KEGG: cyt:cce_0793 hypothetical protein.
   
 0.879
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
 
 0.847
EHA60357.1
KEGG: pmf:P9303_05261 ferredoxin; TIGRFAM: Ferredoxin [2Fe-2S], plant; PFAM: Ferredoxin.
    
 
 0.738
EHA64036.1
TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: pmf:P9303_18571 NAD(P)H-quinone oxidoreductase subunit 4; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
    
   0.708
EHA64157.1
TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: gvi:gvip277 NAD(P)H-quinone oxidoreductase subunit D4; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
    
   0.708
ndhD
NAD(P)H-quinone oxidoreductase chain 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family.
    
   0.708
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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