STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64056.1PFAM: Cytochrome c, class I; KEGG: npu:Npun_R2788 cytochrome c, class I. (144 aa)    
Predicted Functional Partners:
EHA64126.1
KEGG: pmf:P9303_18191 cytochrome c, class IC:cytochrome c, class I.
  
  
  0.882
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
 
  
 0.861
psbU
Photosystem II 12 kDa extrinsic protein; Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
   
 0.775
EHA64057.1
PFAM: Uncharacterised protein family, nitrogen fixation; KEGG: pmt:PMT0448 hypothetical protein.
       0.773
EHA64351.1
PFAM: Photosystem I PsaF, reaction centre subunit III; KEGG: syf:Synpcc7942_1250 photosystem I reaction center subunit III precursor.
  
   
 0.753
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.735
EHA58618.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_11831 zeta-carotene desaturase-like protein.
  
     0.712
EHA63644.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_2158 allophycocyanin, beta subunit.
  
   
 0.685
EHA62266.1
KEGG: syf:Synpcc7942_0398 hypothetical protein.
  
     0.684
EHA63440.1
KEGG: pmf:P9303_15341 hypothetical protein.
  
     0.682
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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