STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64057.1PFAM: Uncharacterised protein family, nitrogen fixation; KEGG: pmt:PMT0448 hypothetical protein. (67 aa)    
Predicted Functional Partners:
EHA64056.1
PFAM: Cytochrome c, class I; KEGG: npu:Npun_R2788 cytochrome c, class I.
       0.773
EHA64055.1
Plastocyanin; KEGG: pmt:PMT0447 plastocyanin; TIGRFAM: Plastocyanin; PFAM: Blue (type 1) copper domain.
       0.620
EHA64058.1
TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: pmg:P9301_04451 hypothetical protein.
       0.538
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.532
EHA64054.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmt:PMT0446 hypothetical protein.
       0.532
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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