STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64118.1Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase. (212 aa)    
Predicted Functional Partners:
EHA64119.1
PFAM: Protein of unknown function DUF2214, membrane; KEGG: pmt:PMT0455 hypothetical protein.
       0.784
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.773
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.772
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.766
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.761
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.757
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
  
     0.756
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.755
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.752
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.751
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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