STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64119.1PFAM: Protein of unknown function DUF2214, membrane; KEGG: pmt:PMT0455 hypothetical protein. (163 aa)    
Predicted Functional Partners:
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
       0.784
EHA64228.1
KEGG: pmj:P9211_04981 hypothetical protein.
  
     0.567
psbL
Photosystem II protein PsbL; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
  
     0.524
EHA60110.1
KEGG: pmm:PMM1307 hypothetical protein.
  
     0.507
EHA64121.1
PFAM: Protein of unknown function DUF1232; KEGG: pmt:PMT0457 hypothetical protein.
 
     0.503
EHA63206.1
KEGG: pmt:PMT0859 hypothetical protein.
  
     0.500
EHA63987.1
KEGG: syn:slr0069 hypothetical protein.
  
     0.488
EHA58612.1
KEGG: pmf:P9303_19361 hypothetical protein.
  
     0.484
EHA64120.1
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.474
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.468
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.