STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64124.1KEGG: pmt:PMT0460 hypothetical protein. (190 aa)    
Predicted Functional Partners:
EHA64123.1
KEGG: pmt:PMT0459 hypothetical protein.
       0.773
EHA64121.1
PFAM: Protein of unknown function DUF1232; KEGG: pmt:PMT0457 hypothetical protein.
       0.639
EHA64122.1
KEGG: pmt:PMT0458 hypothetical protein.
       0.639
EHA61939.1
KEGG: pmt:PMT2164 metallo-beta-lactamase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; Beta-lactamase-like; SMART: Flavin reductase-like, FMN-binding; Beta-lactamase-like; overlaps another CDS with the same product name.
     
 0.541
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
 
     0.530
EHA64120.1
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.498
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.497
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.488
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.467
EHA60372.1
PFAM: Ferredoxin thioredoxin reductase, alpha chain; KEGG: syn:ssr0330 ferredoxin-thioredoxin reductase, variable chain.
  
     0.454
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.