STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64126.1KEGG: pmf:P9303_18191 cytochrome c, class IC:cytochrome c, class I. (108 aa)    
Predicted Functional Partners:
EHA64056.1
PFAM: Cytochrome c, class I; KEGG: npu:Npun_R2788 cytochrome c, class I.
  
  
  0.882
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
  
 0.721
pcxA
Envelope membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
  
     0.682
EHA63926.1
PFAM: Cytochrome c, class I; KEGG: pmf:P9303_17581 cytochrome c, class IC:cytochrome c, class I.
  
  
 
0.679
EHA60410.1
KEGG: naz:Aazo_2433 allophycocyanin subunit beta; TIGRFAM: Allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
   
 0.651
EHA63644.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_2158 allophycocyanin, beta subunit.
  
   
 0.649
EHA63377.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyn:Cyan7425_1034 phycobilisome protein.
  
     0.648
EHA60409.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0327 allophycocyanin alpha chain.
  
     0.637
EHA59370.1
PFAM: PBS lyase HEAT-like repeat; KEGG: syf:Synpcc7942_1054 heat repeat-containing PBS lyase; overlaps another CDS with the same product name.
  
     0.637
EHA59372.1
KEGG: cyt:cce_2652 phycocyanin alpha subunit; TIGRFAM: Phycocyanin, alpha subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
   
 0.625
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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