STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64145.1PFAM: Glycosyl transferase, family 2; KEGG: pmf:P9303_08261 cell wall biosynthesis glycosyltransferase. (251 aa)    
Predicted Functional Partners:
EHA64144.1
PFAM: Protein of unknown function DUF2064; KEGG: pmf:P9303_08281 hypothetical protein.
     0.972
EHA64143.1
PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: pmt:PMT1188 serine protease trypsin family protein; SMART: PDZ/DHR/GLGF.
       0.784
EHA63208.1
PFAM: Radical SAM; KEGG: pmt:PMT0862 hypothetical protein.
  
     0.769
EHA61968.1
PFAM: SNARE associated Golgi protein; KEGG: pmt:PMT2186 hypothetical protein.
  
     0.745
EHA63021.1
PFAM: Methyltransferase type 11; KEGG: pmt:PMT1171 methyltransferase.
  
     0.678
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
  
 
 0.610
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
       0.602
EHA64001.1
KEGG: ana:all1003 hypothetical protein.
  
     0.506
EHA62513.1
Hypothetical protein; KEGG: ace:Acel_0422 glycosyl transferase family protein.
  
 
 0.457
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
   
 
 0.412
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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