STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64146.1PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: pmt:PMT1191 putative acetyltransferase. (167 aa)    
Predicted Functional Partners:
EHA62350.1
PFAM: Protein of unknown function DUF1778; KEGG: apa:APP7_1600 hypothetical protein.
   
   0.804
EHA64346.1
KEGG: pme:NATL1_05181 hypothetical protein.
  
     0.638
EHA59154.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_00551 putative photosystem I assembly related protein Ycf37.
  
     0.601
EHA64147.1
Esterase; KEGG: syf:Synpcc7942_0774 esterase.
       0.586
EHA63192.1
Protein of unknown function DUF2488; PFAM: Uncharacterised protein family Ycf54; KEGG: syf:Synpcc7942_0988 hypothetical protein.
  
     0.578
menA
1,4-dihydroxy-2-naphthoate phytyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily.
  
  
  0.578
EHA61774.1
Universal protein YeaZ; KEGG: pmt:PMT1999 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease.
  
 0.566
EHA63289.1
KEGG: pmf:P9303_14241 hypothetical protein.
  
     0.563
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.557
EHA64383.1
KEGG: pmf:P9303_18001 hypothetical protein.
  
     0.543
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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