STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64147.1Esterase; KEGG: syf:Synpcc7942_0774 esterase. (248 aa)    
Predicted Functional Partners:
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
  
 0.959
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
  
 0.959
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
   
 
 0.878
EHA62445.1
KEGG: pmt:PMT0149 hypothetical protein.
  
     0.750
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.747
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.742
EHA63302.1
OstA family protein; PFAM: Organic solvent tolerance-like, N-terminal; KEGG: pmt:PMT0573 hypothetical protein.
  
     0.740
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.739
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.738
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.727
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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