STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64168.1KEGG: pmf:P9303_08041 hypothetical protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria. (261 aa)    
Predicted Functional Partners:
EHA64160.1
KEGG: pmt:PMT1200 putative carboxysome peptide B; TIGRFAM: Carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
 
 
 
 0.956
EHA64161.1
KEGG: pmf:P9303_08131 putative carboxysome peptide A; TIGRFAM: Carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
 
 
 
 0.956
EHA64166.1
KEGG: pmj:P9211_05511 carboxysome shell protein CsoS1; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
 
 
 
 0.908
EHA64159.1
KEGG: pmt:PMT1199 carboxysome structural protein CsoS1; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
 
 
 
 0.896
EHA64163.1
KEGG: pmt:PMT1203 carboxysome shell protein CsoS2.
 
   
 0.794
EHA64162.1
KEGG: pmf:P9303_08121 carboxysome shell protein CsoS3; TIGRFAM: Carboxysome shell carbonic anhydrase; PFAM: Carboxysome shell carbonic anhydrase.
 
   
 0.786
EHA64155.1
KEGG: pmt:PMT1198 hypothetical protein.
  
     0.772
EHA59408.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: pmt:PMT1671 carbohydrate kinase.
  
     0.698
EHA64169.1
KEGG: pmf:P9303_08031 hypothetical protein.
       0.546
EHA64164.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: pmj:P9211_05531 ribulose bisphosphate carboxylase, small chain; SMART: Ribulose bisphosphate carboxylase, small chain.
 
 
 
 0.488
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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