STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64186.1PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pma:Pro0533 dehydrogenase. (373 aa)    
Predicted Functional Partners:
EHA64187.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
 
 
 
 0.999
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
     
 0.803
EHA63281.1
KEGG: pmt:PMT0793 ribonucleotide reductase (class II); TIGRFAM: Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.718
EHA59340.1
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: pmf:P9303_22881 hypothetical protein.
  
     0.711
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.709
EHA64184.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pmf:P9303_07831 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.693
EHA64183.1
KEGG: pmt:PMT1227 putative GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase.
     
 0.682
EHA59356.1
Transcriptional regulator PadR family protein; PFAM: Transcription regulator PadR N-terminal-like; KEGG: tel:tlr1955 period-extender gene product.
  
     0.671
EHA60650.1
KEGG: pmt:PMT1970 hypothetical protein.
  
     0.630
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
  
     0.625
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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