Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EHA64190.1PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein. (303 aa)    
Predicted Functional Partners:
EHA64189.1
RNA binding S1 domain protein; KEGG: pmt:PMT1233 30S ribosomal protein S1 homolog B, putative Nbp1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1.
 
    0.852
EHA64191.1
KEGG: pmt:PMT1235 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.815
EHA63626.1
PFAM: Protein of unknown function DUF1350; KEGG: pmt:PMT0388 hypothetical protein.
  
     0.773
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
     0.773
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.773
EHA63464.1
KEGG: pmf:P9303_15591 hypothetical protein.
  
     0.771
psb28
TIGRFAM: Photosystem II Psb28, class 1; HAMAP: Photosystem II Psb28, class 1; KEGG: pmf:P9303_16381 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; Belongs to the Psb28 family.
  
     0.771
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.771
EHA60626.1
KEGG: pmt:PMT0176 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase.
  
    0.769
EHA63149.1
PFAM: Photosystem II PsbP, oxygen evolving complex; KEGG: pmf:P9303_09721 photosystem II oxygen evolving complex protein PsbP.
  
     0.766
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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