STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64191.1KEGG: pmt:PMT1235 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family. (272 aa)    
Predicted Functional Partners:
EHA64189.1
RNA binding S1 domain protein; KEGG: pmt:PMT1233 30S ribosomal protein S1 homolog B, putative Nbp1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1.
     
 0.814
EHA64190.1
PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein.
       0.813
EHA60215.1
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.739
EHA64188.1
PFAM: Creatininase; KEGG: pmt:PMT1232 creatininase.
       0.585
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
  0.584
EHA63648.1
KEGG: oan:Oant_2440 UreA transporter; PFAM: Urea transporter; EF-hand; SMART: Calcium-binding EF-hand.
  
     0.462
EHA60469.1
HAMAP: Aspartoacylase; KEGG: pmf:P9303_04021 aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.456
EHA64187.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
       0.454
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.450
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.435
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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